Publications
AI-driven Simulation and Design Lab
Name*: Contributed equally
Name: Corresponding author
Rapid, scalable, and generalizable computational lithography with neural operators
Seung-Woo Lee, Jinho Lee, Jaehoon Kim, Yunhyoung Nam, Hongchang Lee, Yaejin Lee, and Do-Nyun Kim
submitted, (2026)
Stress and temperature-related topology optimization using multiple materials with steady-state thermal-mechanical loading
Minh-Ngoc Nguyen and Do-Nyun Kim
Classifying multi-state DNA origami: an automated approach with minimal labeling and confidence-based filtering
Hongchang Lee, Seo Hyun Kwon, and Do-Nyun Kim
High-fidelity synthesis of slender defects via single-image-based latent blending for data-driven defect inspection
*Jeongmin Lee, *Yunhyoung Nam, Young-joo Kim, Jihye Lee, and Do-Nyun Kim
Density-based topology optimization on a deformable unstructured mesh with enriched finite elements
Kyusoon Jung, Giseok Yun, and Do-Nyun Kim
Snail tentacle-inspired reconfigurable suction cup with structurally embedded multi-stability
Harnessing circular hole arrays to reduce the thermal deformation of sandwich composite panels
Hui Sik Kim, Sang Hoon Yoon, Jun Sub Bae, and Do-Nyun Kim
Experimental validation of calibration constants determined by a deep operator network for IHD in laminated composite materials
Teubes Christiaan Smit, Seung-Woo Lee, Do-Nyun Kim, and Robert Grant Reid
ALOHA: Anomaly-generating latent operator with hierarchical attention for fine-grained defect synthesis
Jeongmin Lee, Yunhyoung Nam, Jaehoon Kim, and Do-Nyun Kim
in revision, (2026)
Mechanochemical computing on DNA origami with multi-state folding
*Myoungseok Kim, *Dongsik Seo, Grigory Tikhomirov, and Do-Nyun Kim
De novo design of DNA origami with a generative diffusion model
*Chien Truong-Quoc, *Kyounghwa Jeon, Jinho Kim, Seo Hyun Kwon, Dongsik Seo, Chanseok Lee, and Do-Nyun Kim
Uncovering design and assembly rules for mRNA– DNA origami
*Jack Y. Wang, *Jared Huzar, *Myoungseok Kim, Taeyoung Ryu, Nahtalee R. Lomeli, Derfogail Delcassian, Do-Nyun Kim, and Grigory Tikhomirov
Nano Letters, published online, (2026)
Selecting laminate configurations for training a DeepONet to predict IHD calibration constants in FRP laminates
Seung-Woo Lee, Teubes Christiaan Smit, Do-Nyun Kim, and Robert Grant Reid
Journal of Engineering Materials and Technology, in press, (2026)
Membrane-targeted DNA frameworks with biodegradability recover cellular function and morphology from frozen cells
*Yedam Lee, *Woo Hyuk Jung, *Kyounghwa Jeon, Eui Bum Choi, Taeyoung Ryu, Chanseok Lee, Do-Nyun Kim, and Dong June Ahn
Trends in Biotechnology, 43: 3196-3216, (2025)
SNUPI: A computational framework for rapid mechanical analysis of structured DNA assemblies
Jun Hyeong Park, Do-Nyun Kim, and Jae Young Lee
JACS Au, 5: 5813-5820, (2025)
